Exploring the Mechanisms of Aging & Genomic Instability Using Microscopy, Nematodes, Fission Yeast,
& Computational Biology
|
The Escorcia lab investigates the intricate interplay between the hallmarks of aging and genomic instability, uncovering how these factors collectively drive biological aging and the onset of age-related diseases. Using the model organisms Schizosaccharomyces pombe (fission yeast) and Caenorhabditis elegans (nematode), alongside human genomic datasets, we aim to dissect the molecular, cellular, and physiological mechanisms underlying these processes. A central focus of our research is dynamic visualization of cellular responses to genetic and environmental perturbations, leveraging advanced microscopy techniques such as fluorescence and live-cell imaging. By integrating machine learning approaches, including automated cell segmentation and dimensional analysis, we streamline high-throughput experiments that quantify morphological and physiological changes with precision. Additionally, we have developed innovative methodologies, such as micro-pad platforms, to enhance imaging consistency and reproducibility in challenging experimental conditions. Our lab also emphasizes the development of computational pipelines that empower researchers to seamlessly transition from literature review to hypothesis generation via an in silico detour. By employing tools like structural modeling, mutation effect prediction, and high-throughput genomic analysis, we aim to refine research scopes and maximize the impact of experimental efforts. This approach allows us to identify key molecular drivers and prioritize interventions with the greatest translational potential.
We are particularly interested in how genomic instability impacts cellular processes such as DNA damage response, replication stress, lipid homeostasis, and aging phenotypes. Our work also explores early-life environmental exposures and their long-term effects on cellular and organismal aging, providing insights into how developmental cues influence healthspan. Our goal is to bridge fundamental discoveries with technological and translational advancements by identifying molecular targets, developing innovative tools, and creating data-driven strategies to mitigate the consequences of genomic instability. We strive to contribute to a deeper understanding of biological aging and the design of interventions that promote healthier aging across diverse biological systems. |